Browse of TCMCG057C07160 protein

CDS

Accession Number	TCMCG057C07160
gbkey	CDS
Protein Id	XP_018469741.1
Location	complement(join(27912395..27912436,27912532..27912618,27912721..27912795,27912896..27913012,27913099..27913182,27913374..27913439,27913581..27913646,27913897..27913968,27914056..27914157,27914247..27914424,27914499..27914554,27914881..27914988,27915063..27915131,27915203..27915311,27915534..27915622,27915739..27915813,27916176..27916298,27916535..27916654,27916749..27916829,27916902..27917048,27917125..27917203,27917726..27917800,27917960..27918069,27918155..27918253,27918564..27918679,27918766..27918874,27918954..27919172,27919267..27919532,27919878..27920035,27920128..27920278,27920406..27920475,27920724..27920753))
Gene	LOC108841484
GeneID	108841484
Organism	Raphanus sativus

Protein

Length	1115aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018614239.1
Definition	PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	O
Description	Belongs to the peptidase C19 family
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko01002        [VIEW IN KEGG] ko04121        [VIEW IN KEGG]
KEGG_ko	ko:K11838        [VIEW IN KEGG]
EC	3.4.19.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko04068        [VIEW IN KEGG] ko05168        [VIEW IN KEGG] ko05169        [VIEW IN KEGG] ko05203        [VIEW IN KEGG] map04068        [VIEW IN KEGG] map05168        [VIEW IN KEGG] map05169        [VIEW IN KEGG] map05203        [VIEW IN KEGG]
GOs	GO:0001101        [VIEW IN EMBL-EBI] GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004843        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006508        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0007154        [VIEW IN EMBL-EBI] GO:0007165        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008233        [VIEW IN EMBL-EBI] GO:0008234        [VIEW IN EMBL-EBI] GO:0009719        [VIEW IN EMBL-EBI] GO:0009725        [VIEW IN EMBL-EBI] GO:0009753        [VIEW IN EMBL-EBI] GO:0009755        [VIEW IN EMBL-EBI] GO:0009867        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010033        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0019783        [VIEW IN EMBL-EBI] GO:0023052        [VIEW IN EMBL-EBI] GO:0032870        [VIEW IN EMBL-EBI] GO:0036459        [VIEW IN EMBL-EBI] GO:0042221        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050794        [VIEW IN EMBL-EBI] GO:0050896        [VIEW IN EMBL-EBI] GO:0051716        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070011        [VIEW IN EMBL-EBI] GO:0070887        [VIEW IN EMBL-EBI] GO:0071229        [VIEW IN EMBL-EBI] GO:0071310        [VIEW IN EMBL-EBI] GO:0071395        [VIEW IN EMBL-EBI] GO:0071495        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0101005        [VIEW IN EMBL-EBI] GO:0140096        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1901700        [VIEW IN EMBL-EBI] GO:1901701        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGACTATGGTGACTCCGCCTCCCGTTGATCAGCAAGAGGATGAGGAGATGCTTGTTCCCCATTCAGATTTGGTCGATGGTACTGCTCAGCCTATGGAAGTGTCCGAAGCTGAGACTGCTGTGAGTACCGTGGAGAACCAGCCAGCTGAGGAGCCTCCCACTCTGAAATTCACGTGGACTATCCCACACTTCTCTAGGATTAACACGAGGAAGCAGTACTCCGATGTGTTTGTTGTTGGAGGTTACAAATGGCGCATATTGATTTTCCCGAAAGGGAACAATGTTGACCATTTGTCCATGTACTTGGATGTTGCTGATGCTGCGAGTTTGCCTTACGGTTGGAGCAGATATGCTCAGTTCAGCCTGGCTGTTGTCAATCAAGTCCACACCAGATACACCATTAGAAAAGAAACGCAACATCAATTCAATGCGAGAGAAAGCGATTGGGGATTTACGTCATTCATGCCTCTTAGCGAACTTTATGATCCTACTAGAGGATATTTGGCGAATGATACTGTTTACATTGAAGCTGAAGTCGTTGTGCGTAAGGTTCTTGATTATTGGTCTTACGACTCTAAAAAGGAGACCGGGTTTGTTGGTCTCAAGAACCAAGGTGCAACTTGTTACATGAATTCTCTTCTGCAGACACTATACCACATTCCTTACTTCAGAAAGGCTGTATACCACATGCCAACAACTGAGAACGATGCGCCCACAGCAAGTATACCTTTGGCTCTCCAAAGTTTGTTTTACAAGCTCCAATATAACGACACCAGTGTTGCGACAAAAGAGCTGACAAAGTCGTTTGGTTGGGACACATATGATTCTTTCATGCAACATGATGTCCAAGAACTCAATCGAGTTCTCTGCGAGAAACTTGAGGACAAAATGAAGGGAACTGTTGTGGAGGGAACAATACAACAGCTATTTGAAGGCCACCATATGAATTATATCGAGTGCATAAATGTAGATTACAAATCTACACGGAAAGAATCATTTTATGACCTTCAGCTGGATGTTAAAGGCTGCAAGGATGTTTATGCTTCTTTTGACAAATATGTTGAAGTTGAACGCCTTGAAGGAGACAACAAATATCATGCAGAAGGACATGGATTACAGGATGCAAAAAAGGGTGTTCTTTTCATAGACTTTCCACCTGTTCTTCAGCTCCAGCTCAAAAGGTTTGAATATGACTTCATGAGGGATTCCATGGTGAAGATAAATGATCGGTATGAATTTCCGCTGGAATTGGACCTTGATAGAGAGGATGGGAAGTATTTATCCCCTGATGCTGACAGGAGTGTCCGCAACCTGTATACACTTCACAGTGTCTTAGTTCATAGTGGAGGAGTACATGGTGGGCATTATTACGCATTTATAAGGCCCACGCTGTCAGATCAATGGTATAAATTTGATGATGAACGAGTAACCAAGGAGGATTTGAAAAGGGCATTGGAGGAGCAATATGGTGGTGAAGAAGAGCTACCACAGACTAATCCCGGTTTCAATAACCCTCCTTTCAAATTCACAAAGTACTCGAATGCATATATGCTTGTATATATCCGGGAAAGTGACAAAGATAAAATAATCTGCAACGTTGATGAGAAAGACATTGCTGAACACTTAAGGGTGAGGCTGAAGAAGGAACAAGAAGAAAAGGAAGACAAAAGAAAATACAAGGCACAAGCTCACCTCTTTACGATAATTAAGGTTGCAAGAGATCAAGACCTTAAGGAACAAATTGGAAAGGATATATATTTTGATCTTGTTGATCATGACAAAGTTCGTAGTTTCCGGATCCAGAAACAGACACCGTTTCAACAGTTTAAGGAGGAGGTGGCCAAAGAATTTGGTATACCTGTTCAGTGTCAGAGGTTCTGGATCTGGGCAAAGCGACAAAACCATACCTATCGTCCCAATCGCCCACTTACACCTCAGGAGGAATTACAACCGGTTGGACAAATTAGAGAGGCATCTAACAAGGCAAACACTGCCGAACTTAAGCTGTTTTTGGAAGTAGAGCTGCTGGATGAACGTCCTATTCCTCCTCCGGAAAAATCAAAAGAAGATATTCTTCTTTTCTTTAAGCTTTATGACCCCGAGAAGCCAGAGTTAAGGTATGTTGGCAGACTGATGGTGAAAAGTTCCAGTAAGCCTATGGATATAACTGGAAAACTGAATGAAATGGCTGGCTTTGCTCCTGATGAAGAAATAGAACTTTTTGAGGAAATCAAGTTTGAGCCTGGTGTTATGTGCGAACACCTGGATAAGAAAAATTCATTCAGATTGTGTCAAATCGAAGATGGAGATATCATTTGCTTTCAGAAACCTGTTGTTAACAAGGAGATTGAATGCCGCTACCCAGCTGTGCCTTCGTTTCTTGAATATGTCCAGAATCGACAGCTGGTCCGATTTCGTGCTCTGGAAAAACCTAAAGAAGATGAATTCGTTCTGGAGTTGTCAAAGTTGCACAGTTATGACGATGTGGTGGAAAGAGTGGCTCAGAAGCTTGGTCTTGACGATCCATCCAAACTTAGGCTTACATCTCACAATTGCTATTCCCAGCAACCCAAGCCTCAGCCTATAAAATACCGTGGAGTAGAGCGTTTGTCAGACATGTTAGTCCACTACAATCAGACGTCGGATATTTTGTATTATGAAGTTCTTGACATTCCTCTTCCAGAATTGCAAGGTCTTAAAACCTTAAAAGTCGCTTTCCATCATTCCACGAAGGAAGAAGTGGTAATCCACAATATCAGACTCCCTAAACAAAGCACAGTCGGAGATGTTATCAATGAATTAAAAACAAAGGTGGAGCTCTCGCATCCAGATGCAGAATTGAGAATACTTGAGGTGTTCTACCACAAGATCTACAAGATTTTTCCATTAACGGAAAGAATTGAGAATATAAACGACCAATACTGGACTTTGCGAGCTGAAGAGATTCCGGAAGAAGAGAAAAACATTGGTCCAAATGATCGCTTAATTCTTGTGTACCACTTTGCTAAGGAGACTGGACAGAATCAGCAAGTGCAAAACTTTGGGGAGCCCTTTTTCTTGGTAATCCATGAAGGTGAAACTCTTGAAGAAATTAAGAACCGTATCCAAAAGAAGCTTCATGTATCAGATGAGGACTTTGCCAAGTGGAAGTTTGCCTTCATGTCAATGGGACGTCCGGAGTATTTGCAGGACTCAGATGTTGTTTACAATCGCTTTCAGAGAAGAGATGTGTATGGTGCTTTTGAGCAGTATCTCGGGTTGGAGCACACTGATACTTCTCCTAAGAGGGCTTATACTGCAAACCAGAACCGACACGCTTATGAGAAGCCGGTGAAGATATACAATTAG

Protein:   MTMVTPPPVDQQEDEEMLVPHSDLVDGTAQPMEVSEAETAVSTVENQPAEEPPTLKFTWTIPHFSRINTRKQYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADAASLPYGWSRYAQFSLAVVNQVHTRYTIRKETQHQFNARESDWGFTSFMPLSELYDPTRGYLANDTVYIEAEVVVRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTASIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEGDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDSMVKINDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEELPQTNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHLRVRLKKEQEEKEDKRKYKAQAHLFTIIKVARDQDLKEQIGKDIYFDLVDHDKVRSFRIQKQTPFQQFKEEVAKEFGIPVQCQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREASNKANTAELKLFLEVELLDERPIPPPEKSKEDILLFFKLYDPEKPELRYVGRLMVKSSSKPMDITGKLNEMAGFAPDEEIELFEEIKFEPGVMCEHLDKKNSFRLCQIEDGDIICFQKPVVNKEIECRYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKLHSYDDVVERVAQKLGLDDPSKLRLTSHNCYSQQPKPQPIKYRGVERLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHSTKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRILEVFYHKIYKIFPLTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFFLVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDSDVVYNRFQRRDVYGAFEQYLGLEHTDTSPKRAYTANQNRHAYEKPVKIYN